WormBase Tree Display for Variation: WBVar00092261

WBVar00092261 Name: Public_name: ok990
    Other_name: Y47H9C.2.1:c.689-9_1124+28del
    HGVSg: CHROMOSOME_I:g.11847035_11847924del
  Sequence_details: SMap: S_parent: Sequence: Y47H9C
    Flanking_sequences: ggtgcggtccacggctggtccctatatatt actataacaaaaagaaaacaaatacattgt
    Mapping_target: Y47H9C
    Type_of_mutation: Deletion
    PCR_product: OK990_external
      OK990_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031751
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00012948
    Transcript: Y47H9C.2.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y47H9C.2.1:c.689-9_1124+28del
        Intron_number: 6-10/11
        Exon_number: 7-10/12
  Isolation: Mutagen: UV/TMP
  Description: Phenotype_not_observed: WBPhenotype:0000039 Paper_evidence: WBPaper00045834
        Curator_confirmed: WBPerson2987
        Remark: Table 2, Additional file 13A Paper_evidence: WBPaper00045834
            Curator_confirmed: WBPerson2987
      WBPhenotype:0000315 Paper_evidence: WBPaper00045834
        Curator_confirmed: WBPerson2987
        Remark: Additional file 12 Paper_evidence: WBPaper00045834
            Curator_confirmed: WBPerson2987
      WBPhenotype:0000643 Paper_evidence: WBPaper00045834
        Curator_confirmed: WBPerson2987
        Remark: Animals did not show a significant difference in age-related decline of thrashing rate, compared to wild type (N2) controls (Additional file 9) Paper_evidence: WBPaper00045834
            Curator_confirmed: WBPerson2987
      WBPhenotype:0001700 Paper_evidence: WBPaper00045834
        Curator_confirmed: WBPerson2987
        Remark: Figure 3 A-B Paper_evidence: WBPaper00045834
            Curator_confirmed: WBPerson2987
      WBPhenotype:0001726 Paper_evidence: WBPaper00045834
        Curator_confirmed: WBPerson2987
        Remark: Wild-type N2 animals had an average length of 1222 μm and width of 78 μm (Additional file 6). Mutants for dhhc-2(ok990) showed no significant changes in body length or width. Paper_evidence: WBPaper00045834
            Curator_confirmed: WBPerson2987
      WBPhenotype:0001727 Paper_evidence: WBPaper00045834
        Curator_confirmed: WBPerson2987
        Remark: Wild-type N2 animals had an average length of 1222 μm and width of 78 μm (Additional file 6). Mutants for dhhc-2(ok990) showed no significant changes in body length or width. Paper_evidence: WBPaper00045834
            Curator_confirmed: WBPerson2987
      WBPhenotype:0004023 Paper_evidence: WBPaper00045834
        Curator_confirmed: WBPerson2987
        Remark: Additional file 8 Paper_evidence: WBPaper00045834
            Curator_confirmed: WBPerson2987
  Reference: WBPaper00045834
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele