WormBase Tree Display for Variation: WBVar00092265

WBVar00092265 Name: Public_name: ok994
    HGVSg: CHROMOSOME_X:g.10866474_10874818delinsGTCATAAAAT
  Sequence_details: SMap: S_parent: Sequence: T21E8
    Flanking_sequences: tcacaacactgtgtaacactgtgtagttgt ctaagacagaaggctccaaacaacatatag
    Mapping_target: T21E8
    Type_of_mutation: Insertion: GTCATAAAAT
      Deletion
    PCR_product: ok994_external
      ok994_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031754
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00004001
      WBGene00004000
    Transcript: T21E8.1a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: 1049-?
        CDS_position: 1002-?
        Protein_position: 334-?
        Intron_number: 8-17/18
        Exon_number: 8-19/19
      T21E8.2.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 1-12/15
        Exon_number: 1-12/16
      T21E8.1c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: 984-?
        CDS_position: 984-?
        Protein_position: 328-?
        Intron_number: 8-17/17
        Exon_number: 8-18/18
      T21E8.1b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: 825-?
        CDS_position: 825-?
        Protein_position: 275-?
        Intron_number: 6-15/15
        Exon_number: 6-16/16
  Isolation: Mutagen: UV/TMP
  Description: Phenotype_not_observed: WBPhenotype:0001208 Paper_evidence: WBPaper00027644
        Curator_confirmed: WBPerson557
        Remark: Animals were not resistant to RNAi as assayed on either pop-1 RNAi or unc-22 RNAi. Paper_evidence: WBPaper00027644
            Curator_confirmed: WBPerson557
        Phenotype_assay: Treatment: Animals reared on both pop-1 and unc-22 feeding plates at 15, 20, 25, and 26C. Paper_evidence: WBPaper00027644
              Curator_confirmed: WBPerson557
  Reference: WBPaper00027644
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele