WormBase Tree Display for Variation: WBVar00092272
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| WBVar00092272 | Name | Public_name | ok1001 | ||
|---|---|---|---|---|---|
| Other_name | ZK899.8b.1:c.353-3113_353-1610delinsAA | ||||
| ZK899.8d.1:c.254-3113_254-1610delinsAA | |||||
| ZK899.8a.1:c.524-3113_524-1610delinsAA | |||||
| ZK899.8e.1:c.47-3113_47-1610delinsAA | |||||
| ZK899.8i.2:c.-680-3113_-680-1610delinsAA | |||||
| ZK899.8c.1:c.620-3113_620-1610delinsAA | |||||
| ZK899.8i.3:c.-681+2333_-680-1610delinsAA | |||||
| ZK899.8k.1:c.524-3113_524-1610delinsAA | |||||
| HGVSg | CHROMOSOME_X:g.9493428_9494931delinsAA | ||||
| Sequence_details | SMap | S_parent | Sequence | T19C11 | |
| Flanking_sequences | aattttatgatactcatttgtgaattttgg | tatacaggagagtgggcggagtgacagaga | |||
| Mapping_target | T19C11 | ||||
| Type_of_mutation | Insertion | AA | |||
| Deletion | |||||
| PCR_product | ok1001_external | ||||
| ok1001_internal | |||||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00035972 | ||||
| Laboratory | RB | ||||
| Person | WBPerson46 | ||||
| KO_consortium_allele | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00001516 | |||
| Transcript | ZK899.8a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK899.8a.1:c.524-3113_524-1610delinsAA | ||||
| Intron_number | 4/19 | ||||
| ZK899.8i.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK899.8i.2:c.-680-3113_-680-1610delinsAA | ||||
| Intron_number | 1/18 | ||||
| ZK899.8e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK899.8e.1:c.47-3113_47-1610delinsAA | ||||
| Intron_number | 2/16 | ||||
| ZK899.8c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK899.8c.1:c.620-3113_620-1610delinsAA | ||||
| Intron_number | 2/17 | ||||
| ZK899.8b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK899.8b.1:c.353-3113_353-1610delinsAA | ||||
| Intron_number | 3/19 | ||||
| ZK899.8i.3 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK899.8i.3:c.-681+2333_-680-1610delinsAA | ||||
| Intron_number | 1/18 | ||||
| ZK899.8d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK899.8d.1:c.254-3113_254-1610delinsAA | ||||
| Intron_number | 1/16 | ||||
| ZK899.8k.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK899.8k.1:c.524-3113_524-1610delinsAA | ||||
| Intron_number | 4/19 | ||||
| Isolation | Mutagen | UV/TMP | |||
| Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
| Method | KO_consortium_allele |
