WormBase Tree Display for Variation: WBVar00092274

WBVar00092274 Name: Public_name: ok1003
    HGVSg: CHROMOSOME_I:g.13792626_13793410delinsAAAA
  Sequence_details: SMap: S_parent: Sequence: Y37H9A
    Flanking_sequences: tacgagcattatatttttgataaagagaga aaaaaatttttcaatgaaaatttagtttta
    Mapping_target: Y37H9A
    Type_of_mutation: Insertion: AAAA
      Deletion
    PCR_product: ok1003_external
      ok1003_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031760
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00003581
    Transcript: Y37H9A.6.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2/3
        Exon_number: 3-4/4
      Y37H9A.6.2 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2/3
        Exon_number: 3-4/4
  Isolation: Mutagen: UV/TMP
  Description: Phenotype: WBPhenotype:0000136 Paper_evidence: WBPaper00044630
        Curator_confirmed: WBPerson2987
        Remark: ndx-4(ok1003) mutants exhibit an increased expression of pmk-1 mRNA compared to wild type controls (Figure S2) Paper_evidence: WBPaper00044630
            Curator_confirmed: WBPerson2987
  Reference: WBPaper00044630
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele