WormBase Tree Display for Variation: WBVar00092325
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WBVar00092325 | Evidence | Person_evidence | WBPerson2529 | ||
---|---|---|---|---|---|
Name | Public_name | ok1056 | |||
Other_name | K03D10.1.1:c.907-72_1867delinsAGAAATTGGCGCCAGGATATGTGTATACTGTTG | ||||
HGVSg | CHROMOSOME_I:g.14129925_14130957delinsCAACAGTATACACATATCCTGGCGCCAATTTCT | ||||
Sequence_details | SMap | S_parent | Sequence | K03D10 | |
Flanking_sequences | attttcggttgaaattcgcaagattatagcagttttcgatgattttgcgg | atgagaatttggcgccaggatatgtgtatactgttgaggtgagc | |||
Mapping_target | K03D10 | ||||
Type_of_mutation | Insertion | AGAAATTGGCGCCAGGATATGTGTATACTGTTG | |||
Deletion | |||||
PCR_product | ok1056_external | ||||
ok1056_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00031791 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00002181 | |||
Transcript | K03D10.1.1 | VEP_consequence | splice_acceptor_variant,coding_sequence_variant,intron_variant | ||
VEP_impact | HIGH | ||||
HGVSc | K03D10.1.1:c.907-72_1867delinsAGAAATTGGCGCCAGGATATGTGTATACTGTTG | ||||
cDNA_position | ?-1870 | ||||
CDS_position | ?-1867 | ||||
Protein_position | ?-623 | ||||
Intron_number | 5/7 | ||||
Exon_number | 6/8 | ||||
Isolation | Mutagen | UV/TMP | |||
Disease_info | Models_disease | DOID:3614 | |||
Models_disease_in_annotation | WBDOannot00001003 | ||||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |