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WormBase Tree Display for Variation: WBVar00092371

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Name Class

WBVar00092371EvidencePaper_evidenceWBPaper00031296
NamePublic_nameok1102
Other_nameCE31384:p.Ala195SerfsTer92
CE31385:p.Ala195SerfsTer92
Y65B4BR.4b.1:c.579_753del
Y65B4BR.4a.1:c.579_753del
HGVSgCHROMOSOME_I:g.537820_538860del
Sequence_detailsSMapS_parentSequenceY65B4BR
Flanking_sequencesgcggagaccggcgacagcgaagcgtgacacactcagccattgccacagggatgggaaatg
Mapping_targetY65B4BR
Type_of_mutationDeletion
PCR_productOK1102_external
OK1102_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00031879
LaboratoryRB
PersonWBPerson46
KO_consortium_allele
StatusLive
AffectsGeneWBGene00007009
TranscriptY65B4BR.4a.1 (11)
Y65B4BR.4b.1 (11)
InteractorWBInteraction000052312
WBInteraction000503410
IsolationMutagenUV/TMP
GeneticsMapping_dataIn_multi_point5001
DescriptionPhenotypeWBPhenotype:0000050Paper_evidenceWBPaper00031296
Curator_confirmedWBPerson712
PenetranceIncomplete60%Paper_evidenceWBPaper00031296
Curator_confirmedWBPerson712
Phenotype_not_observedWBPhenotype:0000275Paper_evidenceWBPaper00031296
Curator_confirmedWBPerson712
RemarkAnimals are not hypersensitive to UV irradiation. % adult survival 0-96 hours after UV irradiation is similar to wild type animals.Paper_evidenceWBPaper00031296
Curator_confirmedWBPerson712
Phenotype_assayTreatmentAnimals treated with 100 J/m2 UV irradiation. Data was reported as an average of three independent experiments with at least 90 animals each.Paper_evidenceWBPaper00031296
Curator_confirmedWBPerson712
ReferenceWBPaper00031296
RemarkSequenced by the C. elegans Gene Knockout ConsortiumPaper_evidenceWBPaper00041807
MethodKO_consortium_allele