WormBase Tree Display for Variation: WBVar00092380

WBVar00092380 Name: Public_name: ok1112
    Other_name: F54E4.1b.1:c.3884+12_4975-1delinsAAAA
      F54E4.1d.1:c.3857+12_4948-1delinsAAAA
      F54E4.1c.1:c.3857+12_4948-1delinsAAAA
      F54E4.1f.1:c.3890+12_4981-1delinsAAAA
      F54E4.1a.1:c.3884+12_4975-1delinsAAAA
      F54E4.1h.1:c.3851+12_4942-1delinsAAAA
      F54E4.1e.1:c.3890+12_4981-1delinsAAAA
      F54E4.1g.1:c.3851+12_4942-1delinsAAAA
    HGVSg: CHROMOSOME_X:g.14616668_14618088delinsAAAA
  Sequence_details: SMap: S_parent: Sequence: F54E4
    Flanking_sequences: ttgtgagcacaatgaacaagtaagccacac attgcaaaagctgcattccagcaaaatcaa
    Mapping_target: F54E4
    Type_of_mutation: Insertion: AAAA
      Deletion
    PCR_product: ok1112_external
      ok1112_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036076
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00004313
    Transcript: F54E4.1a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F54E4.1a.1:c.3884+12_4975-1delinsAAAA
        Intron_number: 17-20/33
        Exon_number: 18-20/34
      F54E4.1g.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F54E4.1g.1:c.3851+12_4942-1delinsAAAA
        Intron_number: 17-20/34
        Exon_number: 18-20/35
      F54E4.1e.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F54E4.1e.1:c.3890+12_4981-1delinsAAAA
        Intron_number: 16-19/32
        Exon_number: 17-19/33
      F54E4.1d.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F54E4.1d.1:c.3857+12_4948-1delinsAAAA
        Intron_number: 16-19/31
        Exon_number: 17-19/32
      F54E4.1f.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F54E4.1f.1:c.3890+12_4981-1delinsAAAA
        Intron_number: 16-19/31
        Exon_number: 17-19/32
      F54E4.1c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F54E4.1c.1:c.3857+12_4948-1delinsAAAA
        Intron_number: 16-19/32
        Exon_number: 17-19/33
      F54E4.1h.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F54E4.1h.1:c.3851+12_4942-1delinsAAAA
        Intron_number: 17-20/33
        Exon_number: 18-20/34
      F54E4.1b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F54E4.1b.1:c.3884+12_4975-1delinsAAAA
        Intron_number: 16-19/33
        Exon_number: 17-19/34
  Isolation: Mutagen: UV/TMP
  Genetics: Mapping_data: In_multi_point: 5182
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele