WormBase Tree Display for Variation: WBVar00092402

WBVar00092402 Evidence: Paper_evidence: WBPaper00040849
  Name: Public_name: ok1137
    Other_name: Y54G11A.5.1:c.620_973-71del
    HGVSg: CHROMOSOME_II:g.14300258_14301329del
  Sequence_details: SMap: S_parent: Sequence: Y54G11A
    Flanking_sequences: aacgtttttgtgtttcccaaaactagctat gacggtacccatctgggagtcctcgatcgg
    Mapping_target: Y54G11A
    Type_of_mutation: Deletion
    PCR_product: ok1137_external
      ok1137_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036038
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00305822
      WBGene00000831
      WBGene00305820
    Transcript: Y54G11A.22
      Y54G11A.5.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y54G11A.5.1:c.620_973-71del
        cDNA_position: 627-?
        CDS_position: 620-?
        Protein_position: 207-?
        Intron_number: 3-4/5
        Exon_number: 3-4/6
      Y54G11A.24
    Interactor: WBInteraction000518943
      WBInteraction000520386
      WBInteraction000520388
      WBInteraction000525304
      WBInteraction000525326
  Isolation: Mutagen: UV/TMP
  Description: Phenotype (15)
  Reference: WBPaper00040849
    WBPaper00041478
    WBPaper00065316
    WBPaper00060133
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele