WormBase Tree Display for Variation: WBVar00092660

WBVar00092660 Evidence: Person_evidence: WBPerson2969
  Name: Public_name: ok1446
    Other_name: C56G3.1b.1:c.503+24_867del
      C56G3.1a.1:c.443+24_807del
      C56G3.1a.2:c.443+24_807del
    HGVSg: CHROMOSOME_X:g.7386534_7387312del
  Sequence_details: SMap: S_parent: Sequence: C56G3
    Flanking_sequences: ttgataggtatgtagaactttttttttgaa aacaaaatgagcaaaactcgtgctccgcca
    Mapping_target: C56G3
    Type_of_mutation: Deletion
    PCR_product: OK1446_external
      OK1446_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032028
    Laboratory: RB
    Person: WBPerson46
      WBPerson2969
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00016984
    Transcript: C56G3.1b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C56G3.1b.1:c.503+24_867del
        cDNA_position: ?-867
        CDS_position: ?-867
        Protein_position: ?-289
        Intron_number: 4-5/8
        Exon_number: 5-6/9
      C56G3.1a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C56G3.1a.1:c.443+24_807del
        cDNA_position: ?-884
        CDS_position: ?-807
        Protein_position: ?-269
        Intron_number: 5-6/10
        Exon_number: 6-7/11
      C56G3.1a.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C56G3.1a.2:c.443+24_807del
        cDNA_position: ?-818
        CDS_position: ?-807
        Protein_position: ?-269
        Intron_number: 4-5/9
        Exon_number: 5-6/10
  Remark: Allele sequenced by Neline Kriek Curator_confirmed: WBPerson2970
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele