WormBase Tree Display for Variation: WBVar00092729

WBVar00092729 Name: Public_name: ok1518
    Other_name: F42G10.1.2:c.225-6_1434del
      F42G10.1.1:c.225-6_1434del
    HGVSg: CHROMOSOME_X:g.10018818_10020715del
  Sequence_details: SMap: S_parent: Sequence: F42G10
    Flanking_sequences: ggcggtatcttcgagaacatccataaaatg tttgttttttgtaggtgcaagggaaaatgt
    Mapping_target: F42G10
    Type_of_mutation: Deletion
    PCR_product: ok1518_external
      ok1518_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036270
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00009645
    Transcript: F42G10.1.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F42G10.1.2:c.225-6_1434del
        cDNA_position: ?-1648
        CDS_position: ?-1434
        Protein_position: ?-478
        Intron_number: 5-10/12
        Exon_number: 6-11/13
      F42G10.1.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F42G10.1.1:c.225-6_1434del
        cDNA_position: ?-1524
        CDS_position: ?-1434
        Protein_position: ?-478
        Intron_number: 4-9/11
        Exon_number: 5-10/12
  Isolation: Mutagen: UV/TMP
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele