WormBase Tree Display for Variation: WBVar00092735
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WBVar00092735 | Name | Public_name | ok1524 | ||
---|---|---|---|---|---|
HGVSg | CHROMOSOME_I:g.1211445_1214143delinsAGTAGTTA | ||||
Sequence_details | SMap | S_parent | Sequence | Y48G8AL | |
Flanking_sequences | aaagttgttgagatcacactatgatatttt | agggaaatttgactttttctcttttgaatg | |||
Mapping_target | Y48G8AL | ||||
Type_of_mutation | Insertion | AGTAGTTA | |||
Deletion | |||||
PCR_product | ok1524_external | ||||
ok1524_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00036294 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00021685 | |||
Transcript | Y48G8AL.1a.2 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | ||
VEP_impact | HIGH | ||||
Intron_number | 2-4/19 | ||||
Exon_number | 1-4/20 | ||||
Y48G8AL.1a.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | |||
VEP_impact | HIGH | ||||
Intron_number | 2-4/19 | ||||
Exon_number | 1-4/20 | ||||
Isolation | Mutagen | UV/TMP | |||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |