WormBase Tree Display for Variation: WBVar00092779
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WBVar00092779 | Name | Public_name | ok1570 | ||
---|---|---|---|---|---|
HGVSg | CHROMOSOME_I:g.8814531_8815790delinsTT | ||||
Sequence_details | SMap | S_parent | Sequence | F36A2 | |
Flanking_sequences | aagatttgatttaagagccgaacttacatt | acctttccgttgtagattccgatgactcca | |||
Mapping_target | F36A2 | ||||
Type_of_mutation | Insertion | TT | |||
Deletion | |||||
PCR_product | ok1570_external | ||||
ok1570_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00032083 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00004484 | |||
WBGene00009454 | |||||
Transcript | F36A2.6.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | ||
VEP_impact | HIGH | ||||
cDNA_position | 329-? | ||||
CDS_position | 321-? | ||||
Protein_position | 107-? | ||||
Intron_number | 3/4 | ||||
Exon_number | 3-5/5 | ||||
F36A2.7.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | |||
VEP_impact | HIGH | ||||
Intron_number | 3-4/5 | ||||
Exon_number | 4-6/6 | ||||
Isolation | Mutagen | UV/TMP | |||
Genetics | Mapping_data | In_multi_point | 5566 | ||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |