WormBase Tree Display for Variation: WBVar00092838

WBVar00092838 Name: Public_name: ok1630
    Other_name: W02B12.8b.1:c.162-872_297del
      W02B12.8a.1:c.759-872_894del
    HGVSg: CHROMOSOME_II:g.11466937_11467944del
  Sequence_details: SMap: S_parent: Sequence: W02B12
    Flanking_sequences: aactccggattgggcggtcggaggaaagaa agaattaataaaggtatttaataggctagg
    Mapping_target: W02B12
    Type_of_mutation: Deletion
    PCR_product: ok1630_external
      ok1630_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032128
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00002227
      WBGene00012203
    Transcript: W02B12.8a.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: W02B12.8a.1:c.759-872_894del
        cDNA_position: ?-897
        CDS_position: ?-894
        Protein_position: ?-298
        Intron_number: 7/10
        Exon_number: 8/11
      W02B12.7.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-600
        CDS_position: ?-564
        Protein_position: ?-188
        Intron_number: 2-3/6
        Exon_number: 1-4/7
      W02B12.8b.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: W02B12.8b.1:c.162-872_297del
        cDNA_position: ?-297
        CDS_position: ?-297
        Protein_position: ?-99
        Intron_number: 2/4
        Exon_number: 3/5
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele