WormBase Tree Display for Variation: WBVar00092861
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| WBVar00092861 | Name | Public_name | ok1653 | ||
|---|---|---|---|---|---|
| HGVSg | CHROMOSOME_I:g.11887842_11889090del | ||||
| Sequence_details | SMap | S_parent | Sequence | Y47H9C | |
| Flanking_sequences | tcttttgagagagccaataagttttatttt | tccgcttgcgacgacgaggtttggtgtgac | |||
| Mapping_target | Y47H9C | ||||
| Type_of_mutation | Deletion | ||||
| PCR_product | OK1653_external | ||||
| OK1653_internal | |||||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00032148 | ||||
| Laboratory | RB | ||||
| Person | WBPerson46 | ||||
| KO_consortium_allele | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00000821 | |||
| Transcript | Y47H9C.6a.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | ||
| VEP_impact | HIGH | ||||
| cDNA_position | 207-? | ||||
| CDS_position | 156-? | ||||
| Protein_position | 52-? | ||||
| Intron_number | 3-5/5 | ||||
| Exon_number | 3-6/6 | ||||
| Isolation | Mutagen | EMS | |||
| Genetics | Mapping_data | In_multi_point | 5594 | ||
| Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
| Method | KO_consortium_allele |
