WormBase Tree Display for Variation: WBVar00092926

WBVar00092926 Name: Public_name: ok1723
    Other_name: F58B6.3e.2:c.-1069+368_-872+147delinsCAAATTT
      F58B6.3d.1:c.333+368_530+147delinsCAAATTT
      F58B6.3a.1:c.333+368_530+147delinsCAAATTT
      F58B6.3e.3:c.-1069+368_-872+147delinsCAAATTT
      F58B6.3b.1:c.196-563_392+147delinsCAAATTT
      F58B6.3e.1:c.-1069+368_-872+147delinsCAAATTT
    HGVSg: CHROMOSOME_III:g.1083499_1084608delinsCAAATTT
  Sequence_details: SMap: S_parent: Sequence: F58B6
    Flanking_sequences: cacaaaaatacatttttcaacttataaatt aaaaattcgatttttcagtcaaaaacctcaatttttgagcttaaaactcaatttttccctgtaaa
    Mapping_target: F58B6
    Type_of_mutation: Insertion: CAAATTT
      Deletion
    PCR_product: OK1723_external
      OK1723_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00000257
      WBStrain00036505
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00305464
      WBGene00003917
    Transcript: F58B6.3e.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F58B6.3e.1:c.-1069+368_-872+147delinsCAAATTT
        Intron_number: 3-5/12
        Exon_number: 4-5/13
      F58B6.3b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F58B6.3b.1:c.196-563_392+147delinsCAAATTT
        Intron_number: 3-5/11
        Exon_number: 4-5/12
      F58B6.10
      F58B6.3d.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F58B6.3d.1:c.333+368_530+147delinsCAAATTT
        Intron_number: 4-6/10
        Exon_number: 5-6/11
      F58B6.3e.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F58B6.3e.2:c.-1069+368_-872+147delinsCAAATTT
        Intron_number: 2-4/11
        Exon_number: 3-4/12
      F58B6.3a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F58B6.3a.1:c.333+368_530+147delinsCAAATTT
        Intron_number: 4-6/12
        Exon_number: 5-6/13
      F58B6.3e.3 VEP_consequence: splice_acceptor_variant,splice_donor_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F58B6.3e.3:c.-1069+368_-872+147delinsCAAATTT
        Intron_number: 1-3/10
        Exon_number: 2-3/11
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele