WormBase Tree Display for Variation: WBVar00092981
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WBVar00092981 | Name | Public_name | ok1779 | ||
---|---|---|---|---|---|
HGVSg | CHROMOSOME_IV:g.1430980_1433365delinsAA | ||||
Sequence_details | SMap | S_parent | Sequence | Y77E11A | |
Flanking_sequences | tttttttgggacgaaaaaattcgcaaaaaa | ggatccttgtctaacatcgaatcggctttt | |||
Mapping_target | Y77E11A | ||||
Type_of_mutation | Insertion | AA | |||
Deletion | |||||
PCR_product | OK1779_external | ||||
OK1779_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00032206 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00000546 | |||
Transcript | Y77E11A.10.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | ||
VEP_impact | HIGH | ||||
cDNA_position | 680-? | ||||
CDS_position | 625-? | ||||
Protein_position | 209-? | ||||
Intron_number | 5-8/9 | ||||
Exon_number | 5-10/10 | ||||
Isolation | Mutagen | EMS | |||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |