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WormBase Tree Display for Variation: WBVar00093034

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Name Class

WBVar00093034NamePublic_nameok1836
HGVSgCHROMOSOME_III:g.4654463_4655818delinsTAGAATGATTCGACGAACGGCTTGATCTACGAGAAGAT
Sequence_detailsSMapS_parentSequenceT23F11
Flanking_sequencescctgaatacggcaagcctttgagctctttgctcttcgtccagtccaattgtttcagggaa
Mapping_targetT23F11
Type_of_mutationInsertionTAGAATGATTCGACGAACGGCTTGATCTACGAGAAGAT
Deletion
PCR_productOK1836_external
OK1836_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00032227
LaboratoryRB
PersonWBPerson46
KO_consortium_allele
StatusLive
AffectsGeneWBGene00011954
TranscriptT23F11.2.1VEP_consequencesplice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
VEP_impactHIGH
cDNA_position?-755
CDS_position?-655
Protein_position?-219
Intron_number2-3/4
Exon_number1-4/5
IsolationMutagenEMS
RemarkSequenced by the C. elegans Gene Knockout ConsortiumPaper_evidenceWBPaper00041807
MethodKO_consortium_allele