WormBase Tree Display for Variation: WBVar00093035
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WBVar00093035 | Name | Public_name | ok1837 | ||
---|---|---|---|---|---|
HGVSg | CHROMOSOME_II:g.1540398_1541834delinsTT | ||||
Sequence_details | SMap | S_parent | Sequence | K05F6 | |
Flanking_sequences | ctgagatttttttcatatgtatcactttgt | tttgatggaaaggtaatcctcaagtagtag | |||
Mapping_target | K05F6 | ||||
Type_of_mutation | Insertion | TT | |||
Deletion | |||||
PCR_product | OK1837_external | ||||
OK1837_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00032228 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00044697 | |||
Transcript | K05F6.11.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | ||
VEP_impact | HIGH | ||||
cDNA_position | ?-653 | ||||
CDS_position | ?-612 | ||||
Protein_position | ?-204 | ||||
Intron_number | 2-3/6 | ||||
Exon_number | 1-4/7 | ||||
Isolation | Mutagen | UV/TMP | |||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |