WormBase Tree Display for Variation: WBVar00093061

WBVar00093061 Name: Public_name: ok1864
    HGVSg: CHROMOSOME_V:g.17023211_17023971delinsCGGAAA
  Sequence_details: SMap: S_parent: Sequence: F49H6
    Flanking_sequences: tattgaacagacgttatcattattcgtcat tcggaatgatcttgtgcagattgttggtga
    Mapping_target: F49H6
    Type_of_mutation: Insertion: CGGAAA
      Deletion
    PCR_product: OK1864_external
      OK1864_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032247
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00009908
    Transcript: F49H6.5a.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-406
        CDS_position: ?-404
        Protein_position: ?-135
        Intron_number: 2/9
        Exon_number: 1-3/10
      F49H6.5a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-638
        CDS_position: ?-404
        Protein_position: ?-135
        Intron_number: 2/8
        Exon_number: 1-3/9
      F49H6.5b.1 VEP_consequence: coding_sequence_variant,5_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: ?-203
        CDS_position: ?-203
        Protein_position: ?-68
        Exon_number: 1/6
  Isolation: Mutagen: UV/TMP
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele