WormBase Tree Display for Variation: WBVar00093093

WBVar00093093 Name: Public_name: ok1898
    Other_name: F19H8.1a.1:c.2706+900_2706+1637del
      F19H8.2.2:c.-56+33_429del
    HGVSg: CHROMOSOME_II:g.14604975_14605712del
  Sequence_details: SMap: S_parent: Sequence: F19H8
    Flanking_sequences: tccaaaaagcgaaattacctttgattttcc attctggcaaatggatgagaagggtgacct
    Mapping_target: F19H8
    Type_of_mutation: Deletion
    PCR_product: ok1898_external
      ok1898_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032260
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00008963
      WBGene00006603
    Transcript: F19H8.2.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F19H8.2.2:c.-56+33_429del
        cDNA_position: ?-609
        CDS_position: ?-429
        Protein_position: ?-143
        Intron_number: 1-4/7
        Exon_number: 2-5/8
      F19H8.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F19H8.1a.1:c.2706+900_2706+1637del
        Intron_number: 8/15
      F19H8.2.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-508
        CDS_position: ?-429
        Protein_position: ?-143
        Intron_number: 2-3/6
        Exon_number: 1-4/7
  Isolation: Mutagen: UV/TMP
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele