WormBase Tree Display for Variation: WBVar00093111

WBVar00093111 Name: Public_name: ok1916
    Other_name: R08E3.4b.1:c.435+18_526-129del
      R08E3.4a.1:c.435+18_526-129del
    HGVSg: CHROMOSOME_X:g.4808799_4809803del
  Sequence_details: SMap: S_parent: Sequence: R08E3
    Flanking_sequences: aatttacaattttctctggttttctcctcg ttttaaaaattgctcaccttctggctgaac
    Mapping_target: R08E3
    Type_of_mutation: Deletion
    PCR_product: OK1916_external
      OK1916_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032267
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00197507
      WBGene00019960
    Transcript: R08E3.4b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: R08E3.4b.1:c.435+18_526-129del
        Intron_number: 6-7/12
        Exon_number: 7/13
      R08E3.4a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: R08E3.4a.1:c.435+18_526-129del
        Intron_number: 6-7/10
        Exon_number: 7/11
      R08E3.7 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele