WormBase Tree Display for Variation: WBVar00093142

WBVar00093142 Name: Public_name: ok1947
    Other_name: F46G10.6.1:c.93+6_*187del
    HGVSg: CHROMOSOME_X:g.13349738_13350692del
  Sequence_details: SMap: S_parent: Sequence: C49F8
    Flanking_sequences: caaatcagtgagtaaaaaaaactgaaataa cttacatcggaagaatccgagtgatggcgt
    Mapping_target: C49F8
    Type_of_mutation: Deletion
    PCR_product: ok1947_external
      ok1947_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032284
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00003511
    Transcript: F46G10.6.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F46G10.6.1:c.93+6_*187del
        cDNA_position: ?-909
        Intron_number: 2-4/5
        Exon_number: 3-6/6
    Interactor: WBInteraction000520071
      WBInteraction000520072
      WBInteraction000520073
      WBInteraction000520074
  Isolation: Mutagen: EMS
  Disease_info: Models_disease: DOID:9351
    Models_disease_in_annotation: WBDOannot00000509
      WBDOannot00000510
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
    Longevity phenotype to be tested in FUdR 100g/ml. Ahringer library lacks mxl-3 RNAi clone. Request from O'Rourke lab if needed. Person_evidence: WBPerson3759
  Method: KO_consortium_allele