WormBase Tree Display for Variation: WBVar00093147

WBVar00093147 Name: Public_name: ok1952
    Other_name: C26H9A.1a.1:c.565-22_1320del
      C26H9A.1b.1:c.1297-22_2052del
    HGVSg: CHROMOSOME_IV:g.12644242_12645990del
  Sequence_details: SMap: S_parent: Sequence: C26H9A
    Flanking_sequences: atttgaaaacttttctgaaagtctcacaat gtatttcaaagtattgttgattcatatggt
    Mapping_target: C26H9A
    Type_of_mutation: Deletion
    PCR_product: ok1952_external
      ok1952_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036675
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00006916
    Transcript: C26H9A.1b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C26H9A.1b.1:c.1297-22_2052del
        cDNA_position: ?-2052
        CDS_position: ?-2052
        Protein_position: ?-684
        Intron_number: 7-14/25
        Exon_number: 8-15/26
      C26H9A.1a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C26H9A.1a.1:c.565-22_1320del
        cDNA_position: ?-1320
        CDS_position: ?-1320
        Protein_position: ?-440
        Intron_number: 2-9/20
        Exon_number: 3-10/21
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele