WormBase Tree Display for Variation: WBVar00093155

WBVar00093155 Name: Public_name: ok1961
    Other_name: F36F2.1a.1:c.25+117_399del
    HGVSg: CHROMOSOME_I:g.9018875_9020079del
  Sequence_details: SMap: S_parent: Sequence: F36F2
    Flanking_sequences: tatacttttgtttttttttaacaaaaagat gatgatcatgttattatcacacttttactc
    Mapping_target: F36F2
    Type_of_mutation: Deletion
    PCR_product: ok1961_external
      ok1961_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032291
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00009475
    Transcript: F36F2.1b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-348
        CDS_position: ?-348
        Protein_position: ?-116
        Intron_number: 1-3/3
        Exon_number: 1-4/4
      F36F2.1a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F36F2.1a.1:c.25+117_399del
        cDNA_position: ?-463
        CDS_position: ?-399
        Protein_position: ?-133
        Intron_number: 2-5/6
        Exon_number: 3-6/7
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele