WormBase Tree Display for Variation: WBVar00093172

WBVar00093172 Name: Public_name: ok1978
    HGVSg: CHROMOSOME_III:g.13344510_13345556delinsCAAATCCG
  Sequence_details: SMap: S_parent: Sequence: F53A2
    Flanking_sequences: tgctccagtcgccgagaaatccgccgtcta tgggacagactgcagagaagttgggcgcac
    Mapping_target: F53A2
    Type_of_mutation: Insertion: CAAATCCG
      Deletion
    PCR_product: ok1978_external
      ok1978_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032301
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00009952
      WBGene00002059
    Transcript: F53A2.7.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-500
        CDS_position: ?-478
        Protein_position: ?-160
        Intron_number: 2-3/6
        Exon_number: 1-4/7
      F53A2.6b.1 VEP_consequence: coding_sequence_variant,3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 641-?
        CDS_position: 639-?
        Protein_position: 213-?
        Exon_number: 3-4/4
      F53A2.6a.1 VEP_consequence: coding_sequence_variant,3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 887-?
        CDS_position: 696-?
        Protein_position: 232-?
        Exon_number: 4-5/5
  Isolation: Mutagen: EMS
  Description: Phenotype: WBPhenotype:0000688 Paper_evidence: WBPaper00037963
        Curator_confirmed: WBPerson1148
      WBPhenotype:0000692 Paper_evidence: WBPaper00037963
        Curator_confirmed: WBPerson1148
  Reference: WBPaper00037963
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele