WormBase Tree Display for Variation: WBVar00093221

WBVar00093221 Name: Public_name: ok2032
    Other_name: F54D8.4a.1:c.-8+6_625delinsTATGTCTTTTTCAATTTTCAGAGGCT
    HGVSg: CHROMOSOME_III:g.5083540_5085431delinsAGCCTCTGAAAATTGAAAAAGACATA
  Sequence_details: SMap: S_parent: Sequence: F54D8
    Flanking_sequences: gaagtcgccaaggttcgaaatcagcaagtt atcacctgagaaataatgattgctttcttt
    Mapping_target: F54D8
    Type_of_mutation: Insertion: AGCCTCTGAAAATTGAAAAAGACATA
      Deletion
    PCR_product: OK2032_external
      OK2032_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032336
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00000279
    Transcript: F54D8.4a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F54D8.4a.1:c.-8+6_625delinsTATGTCTTTTTCAATTTTCAGAGGCT
        cDNA_position: ?-825
        CDS_position: ?-625
        Protein_position: ?-209
        Intron_number: 1-5/6
        Exon_number: 2-6/7
      F54D8.4b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-343
        CDS_position: ?-343
        Protein_position: ?-115
        Intron_number: 1-2/3
        Exon_number: 1-3/4
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele