WormBase Tree Display for Variation: WBVar00093226
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WBVar00093226 | Name | Public_name | ok2037 | ||
---|---|---|---|---|---|
Other_name | F54C4.3.1:c.2842-404_3537+80delinsT | ||||
HGVSg | CHROMOSOME_III:g.71966_74316delinsA | ||||
Sequence_details | SMap | S_parent | Sequence | F54C4 | |
Flanking_sequences | ttgattttgaacatgctttttgcgttaaaa | ttttttttcaaattttcatctgaaaaaatc | |||
Mapping_target | F54C4 | ||||
Type_of_mutation | Insertion | A | |||
Deletion | |||||
PCR_product | OK2037_external | ||||
OK2037_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00032341 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00018794 | |||
Transcript | F54C4.3.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||
VEP_impact | HIGH | ||||
HGVSc | F54C4.3.1:c.2842-404_3537+80delinsT | ||||
Intron_number | 16-18/19 | ||||
Exon_number | 17-18/20 | ||||
Isolation | Mutagen | UV/TMP | |||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |