WormBase Tree Display for Variation: WBVar00093250

WBVar00093250 Name: Public_name: ok2063
    HGVSg: CHROMOSOME_IV:g.651959_653074del
  Sequence_details: SMap: S_parent: Sequence: K11H12
    Flanking_sequences: tacaactaaaatcgagccgcggcgcgccgt gaaaaattggtaaagcctatgaaaaagtgc
    Mapping_target: K11H12
    Type_of_mutation: Deletion
    PCR_product: ok2063_external
      ok2063_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032358
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00019658
      WBGene00019665
    Transcript: K11H12.9d.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 1349-?
        Exon_number: 7/7
      K11H12.9a.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 1299-?
        Exon_number: 8/8
      K11H12.9d.3 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 534-?
        Exon_number: 5/5
      K11H12.9c.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 1293-?
        Exon_number: 8/8
      K11H12.9b.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 1304-?
        Exon_number: 7/7
      K11H12.1.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 3/4
        Exon_number: 4-5/5
  Isolation: Mutagen: UV/TMP
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele