WormBase Tree Display for Variation: WBVar00093301
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WBVar00093301 | Name | Public_name | ok2121 | ||||
---|---|---|---|---|---|---|---|
HGVSg | CHROMOSOME_IV:g.13086791_13089259delinsCTGGTCTTCC | ||||||
Sequence_details | SMap | S_parent | Sequence | C39E9 | |||
Flanking_sequences | cgtagttctgttttctgtttttgtgatttt | actttgtgtcctcactcacgctggtctcgg | |||||
Mapping_target | C39E9 | ||||||
Type_of_mutation | Insertion | CTGGTCTTCC | |||||
Deletion | |||||||
PCR_product | ok2121_external | ||||||
ok2121_internal | |||||||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00032395 | ||||||
Laboratory | RB | ||||||
Person | WBPerson46 | ||||||
KO_consortium_allele | |||||||
Status | Live | ||||||
Affects | Gene | WBGene00008033 | |||||
Transcript | C39E9.10.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | ||||
VEP_impact | HIGH | ||||||
cDNA_position | ?-1317 | ||||||
CDS_position | ?-1315 | ||||||
Protein_position | ?-439 | ||||||
Intron_number | 2-3/5 | ||||||
Exon_number | 1-4/6 | ||||||
Isolation | Mutagen | EMS | |||||
Description | Phenotype | WBPhenotype:0000031 | Paper_evidence | WBPaper00058991 | |||
Curator_confirmed | WBPerson712 | ||||||
Image | WBPicture0000014942 | Paper_evidence | WBPaper00058991 | ||||
Curator_confirmed | WBPerson712 | ||||||
WBPhenotype:0000062 | Paper_evidence | WBPaper00058991 | |||||
Curator_confirmed | WBPerson712 | ||||||
Image | WBPicture0000014942 | Paper_evidence | WBPaper00058991 | ||||
Curator_confirmed | WBPerson712 | ||||||
WBPhenotype:0001183 | Paper_evidence | WBPaper00058991 | |||||
Curator_confirmed | WBPerson712 | ||||||
Image | WBPicture0000014942 | Paper_evidence | WBPaper00058991 | ||||
Curator_confirmed | WBPerson712 | ||||||
WBPhenotype:0001384 | Paper_evidence | WBPaper00058991 | |||||
Curator_confirmed | WBPerson712 | ||||||
Image | WBPicture0000014942 | Paper_evidence | WBPaper00058991 | ||||
Curator_confirmed | WBPerson712 | ||||||
Reference | WBPaper00058991 | ||||||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||||
Method | KO_consortium_allele |