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WormBase Tree Display for Variation: WBVar00093301

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Name Class

WBVar00093301NamePublic_nameok2121
HGVSgCHROMOSOME_IV:g.13086791_13089259delinsCTGGTCTTCC
Sequence_detailsSMapS_parentSequenceC39E9
Flanking_sequencescgtagttctgttttctgtttttgtgattttactttgtgtcctcactcacgctggtctcgg
Mapping_targetC39E9
Type_of_mutationInsertionCTGGTCTTCC
Deletion
PCR_productok2121_external
ok2121_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00032395
LaboratoryRB
PersonWBPerson46
KO_consortium_allele
StatusLive
AffectsGeneWBGene00008033
TranscriptC39E9.10.1VEP_consequencesplice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
VEP_impactHIGH
cDNA_position?-1317
CDS_position?-1315
Protein_position?-439
Intron_number2-3/5
Exon_number1-4/6
IsolationMutagenEMS
DescriptionPhenotypeWBPhenotype:0000031Paper_evidenceWBPaper00058991
Curator_confirmedWBPerson712
ImageWBPicture0000014942Paper_evidenceWBPaper00058991
Curator_confirmedWBPerson712
WBPhenotype:0000062Paper_evidenceWBPaper00058991
Curator_confirmedWBPerson712
ImageWBPicture0000014942Paper_evidenceWBPaper00058991
Curator_confirmedWBPerson712
WBPhenotype:0001183Paper_evidenceWBPaper00058991
Curator_confirmedWBPerson712
ImageWBPicture0000014942Paper_evidenceWBPaper00058991
Curator_confirmedWBPerson712
WBPhenotype:0001384Paper_evidenceWBPaper00058991
Curator_confirmedWBPerson712
ImageWBPicture0000014942Paper_evidenceWBPaper00058991
Curator_confirmedWBPerson712
ReferenceWBPaper00058991
RemarkSequenced by the C. elegans Gene Knockout ConsortiumPaper_evidenceWBPaper00041807
MethodKO_consortium_allele