WormBase Tree Display for Variation: WBVar00093309
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| WBVar00093309 | Name | Public_name | ok2130 | ||
|---|---|---|---|---|---|
| HGVSg | CHROMOSOME_I:g.11454604_11455958delinsCAATAAGAGAGGTGTTGA | ||||
| Sequence_details | SMap | S_parent | Sequence | ZK1025 | |
| Flanking_sequences | agatatcaataagagaggtgttgaagatgt | cactctcaatagttttaaaatggtttgata | |||
| Mapping_target | ZK1025 | ||||
| Type_of_mutation | Insertion | CAATAAGAGAGGTGTTGA | |||
| Deletion | |||||
| PCR_product | ok2130_external | ||||
| ok2130_internal | |||||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00032398 | ||||
| Laboratory | RB | ||||
| Person | WBPerson46 | ||||
| KO_consortium_allele | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00014185 | |||
| WBGene00014186 | |||||
| Transcript | ZK1025.6.1 | VEP_consequence | transcript_ablation | ||
| VEP_impact | HIGH | ||||
| Intron_number | 1-3/4 | ||||
| Exon_number | 1-5/5 | ||||
| Pseudogene | ZK1025.5 | VEP_consequence | non_coding_transcript_exon_variant | ||
| VEP_impact | MODIFIER | ||||
| cDNA_position | ?-1 | ||||
| Exon_number | 1/3 | ||||
| Isolation | Mutagen | EMS | |||
| Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
| Method | KO_consortium_allele |
