WormBase Tree Display for Variation: WBVar00093317

WBVar00093317 Name: Public_name: ok2139
    HGVSg: CHROMOSOME_IV:g.1054076_1055327del
  Sequence_details: SMap: S_parent: Sequence: Y55F3AM
    Flanking_sequences: agcttctggagcattggcggcatttgttcg ttcctacttttcccagccaaatcgcttgat
    Mapping_target: Y55F3AM
    Type_of_mutation: Deletion
    PCR_product: ok2139_external
      ok2139_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036759
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00021930
      WBGene00021929
    Transcript: Y55F3AM.12.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-604
        CDS_position: ?-596
        Protein_position: ?-199
        Intron_number: 2-3/5
        Exon_number: 1-4/6
      Y55F3AM.13.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 4/5
        Exon_number: 5-6/6
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele