WormBase Tree Display for Variation: WBVar00093329

WBVar00093329 Name: Public_name: ok2154
    Other_name: Y39G10AR.18a.1:c.1228-1002_1464+223delinsGCTAAAAAA
    HGVSg: CHROMOSOME_I:g.2392249_2393710delinsTTTTTTAGC
  Sequence_details: SMap: S_parent: Sequence: Y39G10AR
    Flanking_sequences: gtcgatttgccggaatgtttcaattccggc tttttttagtgggcacaattgaaaaaacgc
    Mapping_target: Y39G10AR
    Type_of_mutation: Insertion: TTTTTTAGC
      Deletion
    PCR_product: ok2154_external
      ok2154_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032402
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00021474
    Transcript: Y39G10AR.18a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y39G10AR.18a.1:c.1228-1002_1464+223delinsGCTAAAAAA
        Intron_number: 10-11/16
        Exon_number: 11/17
      Y39G10AR.18b.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2-3/7
        Exon_number: 1-3/8
      Y39G10AR.18b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2-3/8
        Exon_number: 1-3/9
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele