WormBase Tree Display for Variation: WBVar00093335

WBVar00093335 Name: Public_name: ok2161
    Other_name: C47A4.2c.1:c.260-226_834+35del
      C47A4.2b.1:c.464-226_1038+35del
      C47A4.2a.1:c.446-226_1020+35del
    HGVSg: CHROMOSOME_IV:g.13729940_13731505del
  Sequence_details: SMap: S_parent: Sequence: C47A4
    Flanking_sequences: agaacataccttttgagtatccgagaaatt tttctctgtgcacaaatttgttttaagttc
    Mapping_target: C47A4
    Type_of_mutation: Deletion
    PCR_product: ok2161_external
      ok2161_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036977
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00172817
      WBGene00008123
      WBGene00173078
      WBGene00046187
      WBGene00168590
      WBGene00050183
      WBGene00048616
      WBGene00167139
    Transcript: C47A4.66
      C47A4.2c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C47A4.2c.1:c.260-226_834+35del
        Intron_number: 2-6/7
        Exon_number: 3-6/8
      C47A4.2b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C47A4.2b.1:c.464-226_1038+35del
        Intron_number: 4-8/10
        Exon_number: 5-8/11
      C47A4.98
      C47A4.125
      C47A4.2a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C47A4.2a.1:c.446-226_1020+35del
        Intron_number: 4-8/10
        Exon_number: 5-8/11
      C47A4.90
      C47A4.130
      C47A4.48
      C47A4.18
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele