WormBase Tree Display for Variation: WBVar00093380

WBVar00093380 Name: Public_name: ok2216
    Other_name: C53D6.3.1:c.88+128_1089delinsGTAAGTGTAATAGA
    HGVSg: CHROMOSOME_IV:g.9017003_9018751delinsGTAAGTGTAATAGA
  Sequence_details: SMap: S_parent: Sequence: C53D6
    Flanking_sequences: attctctttttaatttgacaatcaacaatt aatgtaagtgtaatagaatttcagaattta
    Mapping_target: C53D6
    Type_of_mutation: Insertion: GTAAGTGTAATAGA
      Deletion
    PCR_product: ok2216_external
      ok2216_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036849
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00008280
    Transcript: C53D6.3.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C53D6.3.1:c.88+128_1089delinsGTAAGTGTAATAGA
        cDNA_position: ?-1100
        CDS_position: ?-1089
        Protein_position: ?-363
        Intron_number: 2-9/12
        Exon_number: 3-10/13
  Isolation: Mutagen: EMS
  Description: Phenotype: WBPhenotype:0000643 Paper_evidence: WBPaper00046043
        Curator_confirmed: WBPerson2026
      WBPhenotype:0001315 Paper_evidence: WBPaper00046043
        Curator_confirmed: WBPerson2026
  Reference: WBPaper00046043
    WBPaper00065804
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele