WormBase Tree Display for Variation: WBVar00093415

WBVar00093415 Name: Public_name: ok2254
    HGVSg: CHROMOSOME_X:g.17222413_17223259del
  Sequence_details: SMap: S_parent: Sequence: T25G12
    Flanking_sequences: ttattttgtctcgtgttcgtgttcctcttg atgtaatcatcatgttggtcggcaacaaga
    Mapping_target: T25G12
    Type_of_mutation: Deletion
    PCR_product: ok2254_external
      ok2254_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00037087
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00004270
    Transcript: T25G12.4.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-347
        CDS_position: ?-343
        Protein_position: ?-115
        Intron_number: 2-4/7
        Exon_number: 1-5/8
    Interactor: WBInteraction000505185
  Isolation: Mutagen: EMS
  Description: Phenotype: WBPhenotype:0000030 Paper_evidence: WBPaper00048950
        Curator_confirmed: WBPerson10329
      WBPhenotype:0000195 Paper_evidence: WBPaper00048950
        Curator_confirmed: WBPerson10329
      WBPhenotype:0000402 Paper_evidence: WBPaper00056338
        Curator_confirmed: WBPerson36360
      WBPhenotype:0000420 Paper_evidence: WBPaper00056075
        Curator_confirmed: WBPerson10057
      WBPhenotype:0000554 Paper_evidence: WBPaper00056075
        Curator_confirmed: WBPerson10057
      WBPhenotype:0002159 Paper_evidence: WBPaper00056338
        Curator_confirmed: WBPerson36360
  Reference: WBPaper00048950
    WBPaper00056075
    WBPaper00056338
    WBPaper00065357
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele