WormBase Tree Display for Variation: WBVar00093420

WBVar00093420 Name: Public_name: ok2259
    Other_name: T22D1.9.1:c.185_1764+24del
    HGVSg: CHROMOSOME_IV:g.6908009_6909659del
  Sequence_details: SMap: S_parent: Sequence: T22D1
    Flanking_sequences: TATGAACAAGGGAATAGCCAAAACTCGAGG ATGGCTTGTAAAGTGTTGTGTCCGGTTCAG
    Mapping_target: T22D1
    Type_of_mutation: Deletion
    PCR_product: ok2259_external
      ok2259_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036819
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00004458
    Transcript: T22D1.9.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T22D1.9.1:c.185_1764+24del
        cDNA_position: 194-?
        CDS_position: 185-?
        Protein_position: 62-?
        Intron_number: 3-4/8
        Exon_number: 3-4/9
  Isolation: Mutagen: EMS
  Reference: WBPaper00061173
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
    Created by WBPerson51134 from the NN_VFP_triage_pipeline
    Variation stub/paper connection generated from the May 2021 NN VFP dataset.
  Method: KO_consortium_allele