WormBase Tree Display for Variation: WBVar00093450

WBVar00093450 Name: Public_name: ok2290
    Other_name: Y63D3A.5.1:c.327+20_960del
      Y63D3A.5.2:c.327+20_960del
    HGVSg: CHROMOSOME_I:g.14102445_14103708del
  Sequence_details: SMap: S_parent: Sequence: Y63D3A
    Flanking_sequences: agcagattaaggtaaggaggattttgagcg ccaccaccgcagggagctccccagcaagga
    Mapping_target: Y63D3A
    Type_of_mutation: Deletion
    PCR_product: ok2290_external
      ok2290_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00037094
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00006565
    Transcript: Y63D3A.5.2 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y63D3A.5.2:c.327+20_960del
        cDNA_position: ?-960
        CDS_position: ?-960
        Protein_position: ?-320
        Intron_number: 2/3
        Exon_number: 3/4
      Y63D3A.5.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y63D3A.5.1:c.327+20_960del
        cDNA_position: ?-1004
        CDS_position: ?-960
        Protein_position: ?-320
        Intron_number: 3/4
        Exon_number: 4/5
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele