WormBase Tree Display for Variation: WBVar00093452

WBVar00093452 Name: Public_name: ok2292
    Other_name: C01F6.6i.1:c.358-8_930+306del
      C01F6.6h.1:c.430-8_1003-182del
      C01F6.6c.1:c.430-8_1002+306del
      C01F6.6d.1:c.430-8_1071+237del
      C01F6.6g.1:c.55-8_628-182del
      C01F6.6f.1:c.19-8_592-182del
      C01F6.6b.1:c.781-8_1354-182del
      C01F6.6a.1:c.358-8_931-182del
    HGVSg: CHROMOSOME_IV:g.9127187_9128303del
  Sequence_details: SMap: S_parent: Sequence: F23B2
    Flanking_sequences: gaaatgcaataatattcaacaattatatat gtagacgactatttaatatttaaaactcct
    Mapping_target: F23B2
    Type_of_mutation: Deletion
    PCR_product: ok2292_external
      ok2292_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036880
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00006438
    Transcript: C01F6.6h.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C01F6.6h.1:c.430-8_1003-182del
        Intron_number: 5-8/12
        Exon_number: 6-8/13
      C01F6.6j.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 1-3/5
        Exon_number: 1-3/6
      C01F6.6f.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C01F6.6f.1:c.19-8_592-182del
        Intron_number: 1-4/7
        Exon_number: 2-4/8
      C01F6.6d.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C01F6.6d.1:c.430-8_1071+237del
        Intron_number: 5-8/11
        Exon_number: 6-8/12
      C01F6.6c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C01F6.6c.1:c.430-8_1002+306del
        Intron_number: 5-8/11
        Exon_number: 6-8/12
      C01F6.6g.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C01F6.6g.1:c.55-8_628-182del
        Intron_number: 1-4/7
        Exon_number: 2-4/8
      C01F6.6i.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C01F6.6i.1:c.358-8_930+306del
        Intron_number: 4-7/10
        Exon_number: 5-7/11
      C01F6.6b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C01F6.6b.1:c.781-8_1354-182del
        Intron_number: 2-5/9
        Exon_number: 3-5/10
      C01F6.6a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C01F6.6a.1:c.358-8_931-182del
        Intron_number: 4-7/11
        Exon_number: 5-7/12
      C01F6.6e.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 1-3/6
        Exon_number: 1-3/7
    Interactor: WBInteraction000518919
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele