WormBase Tree Display for Variation: WBVar00093495

WBVar00093495 Name: Public_name: ok2342
    Other_name: B0280.12a.1:c.76+82_544del
      B0280.12b.1:c.76+82_544del
    HGVSg: CHROMOSOME_III:g.7143447_7144675del
  Sequence_details: SMap: S_parent: Sequence: K04G7
    Flanking_sequences: gatatttcggagatttctcgtgcagatatg caagcagttatttatgtgcctacttgaaaa
    Mapping_target: K04G7
    Type_of_mutation: Deletion
    PCR_product: ok2342_external
      ok2342_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032499
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00271641
      WBGene00001613
    Transcript: K04G7.14 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
      B0280.12b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: B0280.12b.1:c.76+82_544del
        cDNA_position: ?-671
        CDS_position: ?-544
        Protein_position: ?-182
        Intron_number: 2-6/21
        Exon_number: 3-7/22
      B0280.12a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: B0280.12a.1:c.76+82_544del
        cDNA_position: ?-626
        CDS_position: ?-544
        Protein_position: ?-182
        Intron_number: 2-6/19
        Exon_number: 3-7/20
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele