WormBase Tree Display for Variation: WBVar00093516

WBVar00093516 Name: Public_name: ok2367
    Other_name: F22G12.5c.1:c.2752-119_3352-200del
      F22G12.5a.1:c.2746-119_3346-200del
    HGVSg: CHROMOSOME_I:g.13171480_13172957del
  Sequence_details: SMap: S_parent: Sequence: F17B5
    Flanking_sequences: tagagatttgccacggagattcttcgagct acagcatcctgtctagatctaggcttaacc
    Mapping_target: F17B5
    Type_of_mutation: Deletion
    PCR_product: ok2367_external
      ok2367_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032520
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00009065
    Transcript: F22G12.5b.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 1/14
        Exon_number: 1/15
      F22G12.5a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F22G12.5a.1:c.2746-119_3346-200del
        Intron_number: 12-16/30
        Exon_number: 13-16/31
      F22G12.5c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F22G12.5c.1:c.2752-119_3352-200del
        Intron_number: 12-16/30
        Exon_number: 13-16/31
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele