WormBase Tree Display for Variation: WBVar00093587

WBVar00093587 Name: Public_name: ok2439
    Other_name: Y45F10D.3a.1:c.154_923+50del
    HGVSg: CHROMOSOME_IV:g.13779249_13780285del
  Sequence_details: SMap: S_parent: Sequence: Y45F10D
    Flanking_sequences: ctttttgcaattcaattttcaaatatttgt gaaatagaggcggggtgtagttttgcaacc
    Mapping_target: Y45F10D
    Type_of_mutation: Deletion
    PCR_product: OK2439_external
      OK2439_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032574
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00001635
    Transcript: Y45F10D.3a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y45F10D.3a.1:c.154_923+50del
        cDNA_position: 154-?
        CDS_position: 154-?
        Protein_position: 52-?
        Intron_number: 1-5/7
        Exon_number: 1-5/8
      Y45F10D.3b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 1-5/6
        Exon_number: 1-5/7
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele