WormBase Tree Display for Variation: WBVar00093603

WBVar00093603 Evidence: Paper_evidence: WBPaper00039810
  Name: Public_name: ok2457
    HGVSg: CHROMOSOME_V:g.15567154_15569021del
  Sequence_details: SMap: S_parent: Sequence: F28F8
    Flanking_sequences: tgtttgaacaggccgcttccagagcactat tgtcggtagaactcgtgacatgattgtgaa
    Mapping_target: F28F8
    Type_of_mutation: Deletion
    PCR_product: ok2457_external
      ok2457_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032584
    Component_of_genotype: WBGenotype00000154
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00009221
    Transcript: F28F8.2.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-1486
        CDS_position: ?-1472
        Protein_position: ?-491
        Intron_number: 2-4/7
        Exon_number: 1-5/8
    Interactor: WBInteraction000501312
      WBInteraction000501313
      WBInteraction000501314
      WBInteraction000535443
  Isolation: Mutagen: UV/TMP
  Description: Phenotype: WBPhenotype:0001184 Paper_evidence: WBPaper00039810
        Curator_confirmed: WBPerson712
        Remark: Animals exhibit more fat mass than wild type. Paper_evidence: WBPaper00039810
            Curator_confirmed: WBPerson712
    Phenotype_not_observed: WBPhenotype:0000154 Paper_evidence: WBPaper00039810
        Curator_confirmed: WBPerson712
        Remark: Animals do not exhibit any apparent reproduction abnormalities. Paper_evidence: WBPaper00039810
            Curator_confirmed: WBPerson712
  Disease_info: Models_disease: DOID:3146
    Models_disease_in_annotation: WBDOannot00001400
  Reference: WBPaper00039810
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele