WormBase Tree Display for Variation: WBVar00093648

WBVar00093648 Name: Public_name: ok2512
    HGVSg: CHROMOSOME_II:g.7099249_7100629del
  Sequence_details: SMap: S_parent: Sequence: T02G5
    Flanking_sequences: gtttatactctggaaaaagttacaaaatca gtgggatcaattgttaaaactgcaactttc
    Mapping_target: T02G5
    Type_of_mutation: Deletion
    PCR_product: ok2512_external
      ok2512_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032611
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00020169
      WBGene00020163
    Transcript: T02G5.13a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: 492-?
        CDS_position: 492-?
        Protein_position: 164-?
        Intron_number: 2/3
        Exon_number: 2-4/4
      T02G5.13b.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: 442-?
        CDS_position: 189-?
        Protein_position: 63-?
        Intron_number: 2/3
        Exon_number: 2-4/4
      T02G5.3.1 VEP_consequence: coding_sequence_variant,3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 2329-?
        CDS_position: 1441-?
        Protein_position: 481-?
        Exon_number: 11-12/12
      T02G5.13b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: 490-?
        CDS_position: 189-?
        Protein_position: 63-?
        Intron_number: 3/4
        Exon_number: 3-5/5
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele