WormBase Tree Display for Variation: WBVar00093715
expand all nodes | collapse all nodes | view schema
WBVar00093715 | Name | Public_name | ok2597 | ||
---|---|---|---|---|---|
HGVSg | CHROMOSOME_I:g.14789609_14790335delinsA | ||||
Sequence_details | SMap | S_parent | Sequence | F39B2 | |
Flanking_sequences | ttatggtaacactttgtggcgggaccaatc | atgtaccacgcaatttccgtctgctggaag | |||
Mapping_target | F39B2 | ||||
Type_of_mutation | Insertion | A | |||
Deletion | |||||
PCR_product | OK2597_external | ||||
OK2597_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00037221 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00006730 | |||
Transcript | F39B2.2.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | ||
VEP_impact | HIGH | ||||
cDNA_position | ?-34 | ||||
CDS_position | ?-7 | ||||
Protein_position | ?-3 | ||||
Intron_number | 2/4 | ||||
Exon_number | 1-3/5 | ||||
Isolation | Mutagen | EMS | |||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |