WormBase Tree Display for Variation: WBVar00093751
expand all nodes | collapse all nodes | view schema
WBVar00093751 | Name | Public_name | ok2640 | ||
---|---|---|---|---|---|
Other_name | F09B9.2a.1:c.1051-97_1390+24del | ||||
F09B9.2b.1:c.1093-97_1432+24del | |||||
HGVSg | CHROMOSOME_X:g.10150622_10151133del | ||||
Sequence_details | SMap | S_parent | Sequence | F09B9 | |
Flanking_sequences | gcagaataaaaattaaaaaaaaatgtttaa | ttgaatcagtagctggctatagagcacaac | |||
Mapping_target | F09B9 | ||||
Type_of_mutation | Deletion | ||||
PCR_product | ok2640_external | ||||
ok2640_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00037520 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00006839 | |||
Transcript | F09B9.2b.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||
VEP_impact | HIGH | ||||
HGVSc | F09B9.2b.1:c.1093-97_1432+24del | ||||
Intron_number | 6-8/10 | ||||
Exon_number | 7-8/11 | ||||
F09B9.2a.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||
VEP_impact | HIGH | ||||
HGVSc | F09B9.2a.1:c.1051-97_1390+24del | ||||
Intron_number | 8-10/13 | ||||
Exon_number | 9-10/14 | ||||
Isolation | Mutagen | EMS | |||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |