WormBase Tree Display for Variation: WBVar00093756
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WBVar00093756 | Name | Public_name | ok2645 | ||
---|---|---|---|---|---|
HGVSg | CHROMOSOME_II:g.7196136_7198245delinsAGTAAAAACGTC | ||||
Sequence_details | SMap | S_parent | Sequence | E04F6 | |
Flanking_sequences | atactttttttgcaaattatttaaaacatc | agtaaaaccattcaaatataatataaattc | |||
Mapping_target | E04F6 | ||||
Type_of_mutation | Insertion | AGTAAAAACGTC | |||
Deletion | |||||
PCR_product | ok2645_external | ||||
ok2645_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00032684 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00017126 | |||
WBGene00017123 | |||||
Transcript | E04F6.3.1 | VEP_consequence | transcript_ablation | ||
VEP_impact | HIGH | ||||
Intron_number | 2-4/5 | ||||
Exon_number | 1-6/6 | ||||
E04F6.6.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | |||
VEP_impact | HIGH | ||||
Intron_number | 6-7/8 | ||||
Exon_number | 7-9/9 | ||||
Isolation | Mutagen | EMS | |||
Description | Phenotype | WBPhenotype:0000059 | Paper_evidence | WBPaper00044266 | |
Curator_confirmed | WBPerson237 | ||||
Reference | WBPaper00044266 | ||||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |