WormBase Tree Display for Variation: WBVar00093785
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WBVar00093785 | Name | Public_name | ok2681 | ||
---|---|---|---|---|---|
Other_name | T19B4.1.1:c.421_825-55del | ||||
HGVSg | CHROMOSOME_I:g.5703396_5703914del | ||||
Sequence_details | SMap | S_parent | Sequence | T19B4 | |
Flanking_sequences | caagatggaataaaatattttgtgctccaa | aaatctaaaatagtcaattttaagaaaaag | |||
Mapping_target | T19B4 | ||||
Type_of_mutation | Deletion | ||||
PCR_product | ok2681_external | ||||
ok2681_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00037097 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00020556 | |||
Transcript | T19B4.1.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||
VEP_impact | HIGH | ||||
HGVSc | T19B4.1.1:c.421_825-55del | ||||
cDNA_position | 423-? | ||||
CDS_position | 421-? | ||||
Protein_position | 141-? | ||||
Intron_number | 5-6/12 | ||||
Exon_number | 5-6/13 | ||||
Isolation | Mutagen | EMS | |||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |