WormBase Tree Display for Variation: WBVar00093786

WBVar00093786 Name: Public_name: ok2682
    Other_name: C54C8.11a.1:c.67_351+23del
      C54C8.11b.1:c.67_351+23del
    HGVSg: CHROMOSOME_I:g.12462242_12462690del
  Sequence_details: SMap: S_parent: Sequence: C54C8
    Flanking_sequences: tttgtcacgtttttgccattggttttggta tttgaggtgatacaaaaaaactgtcaacta
    Mapping_target: C54C8
    Type_of_mutation: Deletion
    PCR_product: ok2682_external
      ok2682_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032708
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00001640
    Transcript: C54C8.11b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C54C8.11b.1:c.67_351+23del
        cDNA_position: 67-?
        CDS_position: 67-?
        Protein_position: 23-?
        Intron_number: 1-2/3
        Exon_number: 1-2/4
      C54C8.11a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C54C8.11a.1:c.67_351+23del
        cDNA_position: 67-?
        CDS_position: 67-?
        Protein_position: 23-?
        Intron_number: 1-2/9
        Exon_number: 1-2/10
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele