WormBase Tree Display for Variation: WBVar00093794
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| WBVar00093794 | Name | Public_name | ok2690 | ||
|---|---|---|---|---|---|
| HGVSg | CHROMOSOME_V:g.10254526_10255697del | ||||
| Sequence_details | SMap | S_parent | Sequence | Y22F5A | |
| Flanking_sequences | taatctgagtaggcattgagcattggacat | gttttgcacacagtaactactaaattcaat | |||
| Mapping_target | Y22F5A | ||||
| Type_of_mutation | Deletion | ||||
| PCR_product | ok2690_external | ||||
| ok2690_internal | |||||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00032716 | ||||
| Laboratory | RB | ||||
| Person | WBPerson46 | ||||
| KO_consortium_allele | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00004405 | |||
| Transcript | C12D8.11.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | ||
| VEP_impact | HIGH | ||||
| cDNA_position | ?-484 | ||||
| CDS_position | ?-476 | ||||
| Protein_position | ?-159 | ||||
| Intron_number | 2/5 | ||||
| Exon_number | 1-3/6 | ||||
| Isolation | Mutagen | EMS | |||
| Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
| Method | KO_consortium_allele |
