WormBase Tree Display for Variation: WBVar00093806

WBVar00093806 Name: Public_name: ok2702
    HGVSg: CHROMOSOME_III:g.8224374_8226557del
  Sequence_details: SMap: S_parent: Sequence: C30A5
    Flanking_sequences: ataatttggaattttattctctttttagcg tcttggagcagaaagactgtttttgagaac
    Mapping_target: C30A5
    Type_of_mutation: Deletion
    PCR_product: ok2702_external
      ok2702_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032728
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00004342
      WBGene00016238
    Transcript: C30A5.3.1 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Intron_number: 2-5/6
        Exon_number: 1-7/7
      C30A5.2.2 VEP_consequence: coding_sequence_variant,5_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: ?-80
        CDS_position: ?-56
        Protein_position: ?-19
        Exon_number: 1-2/6
      C30A5.2.1 VEP_consequence: coding_sequence_variant,5_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: ?-80
        CDS_position: ?-56
        Protein_position: ?-19
        Exon_number: 1-2/7
  Isolation: Mutagen: EMS
  Remark: Sequenced by Sanjib Guha and Maria Gallegos (Gallegos Lab, Cal State University, East Bay).
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele